This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.

It was created by odeSolver configure 1.7.0beta, which was
generated by GNU Autoconf 2.63.  Invocation command line was

  $ ./configure --prefix=/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_R_R-rsbml/R-rsbml/work/rsbml/local --without-graphviz --without-grace

## --------- ##
## Platform. ##
## --------- ##

hostname = yosemite.internal.macports.net
uname -m = x86_64
uname -r = 14.5.0
uname -s = Darwin
uname -v = Darwin Kernel Version 14.5.0: Sun Jun  4 21:40:08 PDT 2017; root:xnu-2782.70.3~1/RELEASE_X86_64

/usr/bin/uname -p = i386
/bin/uname -X     = unknown

/bin/arch              = unknown
/usr/bin/arch -k       = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo      = Mach kernel version:
	 Darwin Kernel Version 14.5.0: Sun Jun  4 21:40:08 PDT 2017; root:xnu-2782.70.3~1/RELEASE_X86_64
Kernel configured for up to 4 processors.
4 processors are physically available.
4 processors are logically available.
Processor type: i486 (Intel 80486)
Processors active: 0 1 2 3
Primary memory available: 14.50 gigabytes
Default processor set: 158 tasks, 499 threads, 4 processors
Load average: 1.54, Mach factor: 2.45
/bin/machine           = unknown
/usr/bin/oslevel       = unknown
/bin/universe          = unknown

PATH: /opt/local/bin
PATH: /opt/local/sbin
PATH: /opt/bblocal/libexec/libarchive
PATH: /bin
PATH: /sbin
PATH: /usr/bin
PATH: /usr/sbin


## ----------- ##
## Core tests. ##
## ----------- ##

configure:1948: checking for a BSD-compatible install
configure:2016: result: /usr/bin/install -c
configure:2027: checking whether build environment is sane
configure:2070: result: yes
configure:2095: checking for a thread-safe mkdir -p
configure:2134: result: config/install-sh -c -d
configure:2147: checking for gawk
configure:2177: result: no
configure:2147: checking for mawk
configure:2177: result: no
configure:2147: checking for nawk
configure:2177: result: no
configure:2147: checking for awk
configure:2163: found /usr/bin/awk
configure:2174: result: awk
configure:2185: checking whether make sets $(MAKE)
configure:2207: result: yes
configure:2398: checking build system type
configure:2416: result: i386-apple-darwin14.5.0
configure:2438: checking host system type
configure:2453: result: i386-apple-darwin14.5.0
configure:2632: checking for C++ compiler version
configure:2640: /opt/local/bin/clang++-mp-16 -std=gnu++17 --version >&5
clang version 16.0.6
Target: x86_64-apple-darwin14.5.0
Thread model: posix
InstalledDir: /opt/local/libexec/llvm-16/bin
configure:2644: $? = 0
configure:2651: /opt/local/bin/clang++-mp-16 -std=gnu++17 -v >&5
clang version 16.0.6
Target: x86_64-apple-darwin14.5.0
Thread model: posix
InstalledDir: /opt/local/libexec/llvm-16/bin
configure:2655: $? = 0
configure:2662: /opt/local/bin/clang++-mp-16 -std=gnu++17 -V >&5
clang: error: argument to '-V' is missing (expected 1 value)
clang: error: no input files
configure:2666: $? = 1
configure:2689: checking for C++ compiler default output file name
configure:2711: /opt/local/bin/clang++-mp-16 -std=gnu++17 -pipe -Os -stdlib=libc++ -arch x86_64 -I/opt/local/include  -L/opt/local/lib -Wl,-headerpad_max_install_names -Wl,-rpath,/opt/local/lib/libgcc -arch x86_64 conftest.cpp -lm -lstdc++ >&5
configure:2715: $? = 0
configure:2753: result: a.out
configure:2772: checking whether the C++ compiler works
configure:2782: ./a.out
configure:2786: $? = 0
configure:2805: result: yes
configure:2812: checking whether we are cross compiling
configure:2814: result: no
configure:2817: checking for suffix of executables
configure:2824: /opt/local/bin/clang++-mp-16 -std=gnu++17 -o conftest -pipe -Os -stdlib=libc++ -arch x86_64 -I/opt/local/include  -L/opt/local/lib -Wl,-headerpad_max_install_names -Wl,-rpath,/opt/local/lib/libgcc -arch x86_64 conftest.cpp -lm -lstdc++ >&5
configure:2828: $? = 0
configure:2854: result: 
configure:2860: checking for suffix of object files
configure:2886: /opt/local/bin/clang++-mp-16 -std=gnu++17 -c -pipe -Os -stdlib=libc++ -arch x86_64 -I/opt/local/include  conftest.cpp >&5
configure:2890: $? = 0
configure:2915: result: o
configure:2919: checking whether we are using the GNU C++ compiler
configure:2948: /opt/local/bin/clang++-mp-16 -std=gnu++17 -c -pipe -Os -stdlib=libc++ -arch x86_64 -I/opt/local/include  conftest.cpp >&5
configure:2955: $? = 0
configure:2972: result: yes
configure:2981: checking whether /opt/local/bin/clang++-mp-16 -std=gnu++17 accepts -g
configure:3011: /opt/local/bin/clang++-mp-16 -std=gnu++17 -c -g -I/opt/local/include  conftest.cpp >&5
configure:3018: $? = 0
configure:3119: result: yes
configure:3153: checking for style of include used by make
configure:3181: result: GNU
configure:3206: checking dependency style of /opt/local/bin/clang++-mp-16 -std=gnu++17
configure:3297: result: gcc3
configure:3360: checking for gcc
configure:3387: result: /opt/local/bin/clang-mp-16
configure:3619: checking for C compiler version
configure:3627: /opt/local/bin/clang-mp-16 --version >&5
clang version 16.0.6
Target: x86_64-apple-darwin14.5.0
Thread model: posix
InstalledDir: /opt/local/libexec/llvm-16/bin
configure:3631: $? = 0
configure:3638: /opt/local/bin/clang-mp-16 -v >&5
clang version 16.0.6
Target: x86_64-apple-darwin14.5.0
Thread model: posix
InstalledDir: /opt/local/libexec/llvm-16/bin
configure:3642: $? = 0
configure:3649: /opt/local/bin/clang-mp-16 -V >&5
clang: error: argument to '-V' is missing (expected 1 value)
clang: error: no input files
configure:3653: $? = 1
configure:3656: checking whether we are using the GNU C compiler
configure:3685: /opt/local/bin/clang-mp-16 -c -g -O2 -pg -Wno-unknown-pragmas -Wall -ansi -std=iso9899:1990 -I/opt/local/include  conftest.c >&5
configure:3692: $? = 0
configure:3709: result: yes
configure:3718: checking whether /opt/local/bin/clang-mp-16 accepts -g
configure:3748: /opt/local/bin/clang-mp-16 -c -g -I/opt/local/include  conftest.c >&5
configure:3755: $? = 0
configure:3856: result: yes
configure:3873: checking for /opt/local/bin/clang-mp-16 option to accept ISO C89
configure:3947: /opt/local/bin/clang-mp-16  -c -g -O2 -pg -Wno-unknown-pragmas -Wall -ansi -std=iso9899:1990 -I/opt/local/include  conftest.c >&5
conftest.c:18:14: warning: a function definition without a prototype is deprecated in all versions of C and is not supported in C2x [-Wdeprecated-non-prototype]
static char *e (p, i)
             ^
1 warning generated.
configure:3954: $? = 0
configure:3977: result: none needed
configure:3997: checking dependency style of /opt/local/bin/clang-mp-16
configure:4088: result: gcc3
configure:4106: checking whether /opt/local/bin/clang-mp-16 accepts -fpic
configure:4132: /opt/local/bin/clang-mp-16 -c -fpic -I/opt/local/include  conftest.c >&5
configure:4139: $? = 0
configure:4154: result: yes
configure:4168: checking how to run the C preprocessor
configure:4208: /opt/local/bin/clang-mp-16 -E -I/opt/local/include  conftest.c
configure:4215: $? = 0
configure:4246: /opt/local/bin/clang-mp-16 -E -I/opt/local/include  conftest.c
conftest.c:11:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
         ^~~~~~~~~~~~~~~~~~
1 error generated.
configure:4253: $? = 1
configure: failed program was:
| /* confdefs.h.  */
| #define PACKAGE_NAME "odeSolver"
| #define PACKAGE_TARNAME "SBML_odeSolver"
| #define PACKAGE_VERSION "1.7.0beta"
| #define PACKAGE_STRING "odeSolver 1.7.0beta"
| #define PACKAGE_BUGREPORT "{raim,xtof}@tbi.univie.ac.at"
| #define PACKAGE "SBML_odeSolver"
| #define VERSION "1.7.0beta"
| #define SHAREDLIBEXT ".dylib"
| /* end confdefs.h.  */
| #include <ac_nonexistent.h>
configure:4286: result: /opt/local/bin/clang-mp-16 -E
configure:4315: /opt/local/bin/clang-mp-16 -E -I/opt/local/include  conftest.c
configure:4322: $? = 0
configure:4353: /opt/local/bin/clang-mp-16 -E -I/opt/local/include  conftest.c
conftest.c:11:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
         ^~~~~~~~~~~~~~~~~~
1 error generated.
configure:4360: $? = 1
configure: failed program was:
| /* confdefs.h.  */
| #define PACKAGE_NAME "odeSolver"
| #define PACKAGE_TARNAME "SBML_odeSolver"
| #define PACKAGE_VERSION "1.7.0beta"
| #define PACKAGE_STRING "odeSolver 1.7.0beta"
| #define PACKAGE_BUGREPORT "{raim,xtof}@tbi.univie.ac.at"
| #define PACKAGE "SBML_odeSolver"
| #define VERSION "1.7.0beta"
| #define SHAREDLIBEXT ".dylib"
| /* end confdefs.h.  */
| #include <ac_nonexistent.h>
configure:4442: checking for ranlib
configure:4458: found /opt/local/bin/ranlib
configure:4469: result: ranlib
configure:4505: checking for a BSD-compatible install
configure:4573: result: /usr/bin/install -c
configure:4584: checking whether make sets $(MAKE)
configure:4606: result: yes
configure:4618: checking for autoconf
configure:4649: result: autoconf
configure:4659: checking for aclocal
configure:4690: result: aclocal
configure:4700: checking for make
configure:4718: found /usr/bin/make
configure:4731: result: /usr/bin/make
configure:4741: checking for ar
configure:4759: found /opt/local/bin/ar
configure:4772: result: /opt/local/bin/ar
configure:4782: checking for swig
configure:4813: result: swig
configure:4823: checking for perl
configure:4841: found /opt/local/bin/perl
configure:4854: result: /opt/local/bin/perl
configure:4913: checking for pkg-config
configure:4931: found /opt/local/bin/pkg-config
configure:4943: result: /opt/local/bin/pkg-config
configure:4968: checking pkg-config is at least version 0.9.0
configure:4971: result: yes
configure:4997: checking for SBML
configure:5004: $PKG_CONFIG --exists --print-errors "libsbml"
configure:5007: $? = 0
configure:5020: $PKG_CONFIG --exists --print-errors "libsbml"
configure:5023: $? = 0
configure:5060: result: yes
configure:5117: checking for correct functioning of SBML
configure:5152: /opt/local/bin/clang-mp-16 -o conftest -g -O2 -pg -Wno-unknown-pragmas -Wall -ansi -std=iso9899:1990 -I/opt/local/include/libxml2 -I/opt/local/include  -L/opt/local/lib -Wl,-headerpad_max_install_names -Wl,-rpath,/opt/local/lib/libgcc -arch x86_64   conftest.c -lm -lstdc++ -L/opt/local/lib -lsbml >&5
clang: error: the clang compiler does not support -pg option on versions of OS X 10.9 and later
configure:5159: $? = 1
configure: failed program was:
| /* confdefs.h.  */
| #define PACKAGE_NAME "odeSolver"
| #define PACKAGE_TARNAME "SBML_odeSolver"
| #define PACKAGE_VERSION "1.7.0beta"
| #define PACKAGE_STRING "odeSolver 1.7.0beta"
| #define PACKAGE_BUGREPORT "{raim,xtof}@tbi.univie.ac.at"
| #define PACKAGE "SBML_odeSolver"
| #define VERSION "1.7.0beta"
| #define SHAREDLIBEXT ".dylib"
| /* end confdefs.h.  */
| #include <sbml/SBMLTypes.h>
| int
| main ()
| {
| SBMLReader_t *sr; sr = SBMLReader_create(); SBMLReader_free(sr);
|   ;
|   return 0;
| }
configure:5186: result: no:
                   CFLAGS=-g -O2 -pg -Wno-unknown-pragmas -Wall -ansi -std=iso9899:1990 -I/opt/local/include/libxml2
                   LDFLAGS=-L/opt/local/lib -Wl,-headerpad_max_install_names -Wl,-rpath,/opt/local/lib/libgcc -arch x86_64  
                   LIBS=-lm -lstdc++ -L/opt/local/lib -lsbml
configure:5192: error: Can not link to SBML Library:
		  Please, make sure to use libSBML version >= 3.0.2 or CVS

## ---------------- ##
## Cache variables. ##
## ---------------- ##

ac_cv_build=i386-apple-darwin14.5.0
ac_cv_c_compiler_gnu=yes
ac_cv_cxx_compiler_gnu=yes
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=set
ac_cv_env_CC_value=/opt/local/bin/clang-mp-16
ac_cv_env_CFLAGS_set=set
ac_cv_env_CFLAGS_value='-pipe -Os -arch x86_64'
ac_cv_env_CPPFLAGS_set=set
ac_cv_env_CPPFLAGS_value='-I/opt/local/include '
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXFLAGS_set=set
ac_cv_env_CXXFLAGS_value='-pipe -Os -stdlib=libc++ -arch x86_64'
ac_cv_env_CXX_set=set
ac_cv_env_CXX_value='/opt/local/bin/clang++-mp-16 -std=gnu++17'
ac_cv_env_FPIC_set=
ac_cv_env_FPIC_value=
ac_cv_env_LDFLAGS_set=set
ac_cv_env_LDFLAGS_value='-L/opt/local/lib -Wl,-headerpad_max_install_names -Wl,-rpath,/opt/local/lib/libgcc -arch x86_64'
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_PKG_CONFIG_set=
ac_cv_env_PKG_CONFIG_value=
ac_cv_env_SBML_CFLAGS_set=
ac_cv_env_SBML_CFLAGS_value=
ac_cv_env_SBML_LIBS_set=
ac_cv_env_SBML_LIBS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_host=i386-apple-darwin14.5.0
ac_cv_objext=o
ac_cv_path_ACLOCAL=aclocal
ac_cv_path_AR=/opt/local/bin/ar
ac_cv_path_AUTOCONF=autoconf
ac_cv_path_MAKE=/usr/bin/make
ac_cv_path_PERL=/opt/local/bin/perl
ac_cv_path_SWIG=swig
ac_cv_path_ac_pt_PKG_CONFIG=/opt/local/bin/pkg-config
ac_cv_path_install='/usr/bin/install -c'
ac_cv_prog_AWK=awk
ac_cv_prog_CPP='/opt/local/bin/clang-mp-16 -E'
ac_cv_prog_ac_ct_CC=/opt/local/bin/clang-mp-16
ac_cv_prog_ac_ct_RANLIB=ranlib
ac_cv_prog_cc_c89=
ac_cv_prog_cc_fpic=yes
ac_cv_prog_cc_g=yes
ac_cv_prog_cxx_g=yes
ac_cv_prog_make_make_set=yes
am_cv_CC_dependencies_compiler_type=gcc3
am_cv_CXX_dependencies_compiler_type=gcc3
pkg_cv_SBML_CFLAGS=-I/opt/local/include/libxml2
pkg_cv_SBML_LIBS='-L/opt/local/lib -lsbml'

## ----------------- ##
## Output variables. ##
## ----------------- ##

ACLOCAL='aclocal'
AMDEPBACKSLASH='\'
AMDEP_FALSE='#'
AMDEP_TRUE=''
AMTAR='${SHELL} /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_R_R-rsbml/R-rsbml/work/rsbml/inst/SBML_odeSolver-1.7.0beta/config/missing --run tar'
AR='/opt/local/bin/ar'
AUTOCONF='autoconf'
AUTOHEADER='${SHELL} /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_R_R-rsbml/R-rsbml/work/rsbml/inst/SBML_odeSolver-1.7.0beta/config/missing --run autoheader'
AUTOMAKE='${SHELL} /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_R_R-rsbml/R-rsbml/work/rsbml/inst/SBML_odeSolver-1.7.0beta/config/missing --run automake-1.10'
AWK='awk'
CC='/opt/local/bin/clang-mp-16'
CCDEPMODE='depmode=gcc3'
CFLAGS='-g -O2 -pg -Wno-unknown-pragmas -Wall -ansi -std=iso9899:1990 -I/opt/local/include/libxml2'
CPP='/opt/local/bin/clang-mp-16 -E'
CPPFLAGS='-I/opt/local/include '
CXX='/opt/local/bin/clang++-mp-16 -std=gnu++17'
CXXDEPMODE='depmode=gcc3'
CXXFLAGS='-pipe -Os -stdlib=libc++ -arch x86_64'
CYGPATH_W='echo'
DEFS=''
DEPDIR='.deps'
DOT=''
ECHO_C='\c'
ECHO_N=''
ECHO_T=''
EGREP=''
EXEEXT=''
FPIC='-fPIC'
GRACE_CFLAGS=''
GRACE_LDFLAGS=''
GRACE_LIBS=''
GRACE_RPATH=''
GRAPHVIZ_CFLAGS=''
GRAPHVIZ_LDFLAGS=''
GRAPHVIZ_LIBS=''
GRAPHVIZ_RPATH=''
GREP=''
HOST_TYPE='darwin'
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
LDFLAGS='-L/opt/local/lib -Wl,-headerpad_max_install_names -Wl,-rpath,/opt/local/lib/libgcc -arch x86_64  '
LIBOBJS=''
LIBS='-lm -lstdc++ -L/opt/local/lib -lsbml'
LTLIBOBJS=''
MAKE='/usr/bin/make'
MAKEINFO='${SHELL} /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_R_R-rsbml/R-rsbml/work/rsbml/inst/SBML_odeSolver-1.7.0beta/config/missing --run makeinfo'
MKDIR_P='config/install-sh -c -d'
OBJEXT='o'
OLD_LIBSBML=''
PACKAGE='SBML_odeSolver'
PACKAGE_BUGREPORT='{raim,xtof}@tbi.univie.ac.at'
PACKAGE_NAME='odeSolver'
PACKAGE_STRING='odeSolver 1.7.0beta'
PACKAGE_TARNAME='SBML_odeSolver'
PACKAGE_VERSION='1.7.0beta'
PATH_SEPARATOR=':'
PERL='/opt/local/bin/perl'
PKG_CONFIG='/opt/local/bin/pkg-config'
RANLIB='ranlib'
SBML_CFLAGS='-I/opt/local/include/libxml2'
SBML_LDFLAGS=''
SBML_LIBS='-L/opt/local/lib -lsbml'
SBML_RPATH=''
SET_MAKE=''
SHAREDLIBEXT='dylib'
SHELL='/bin/sh'
STRIP=''
SUNDIALS_CFLAGS=''
SUNDIALS_LDFLAGS=''
SUNDIALS_LIBS=''
SWIG='swig'
TestDataDirectory='.'
USE_GRACE=''
USE_GRAPHVIZ=''
USE_SBML=''
USE_SUNDIALS=''
VERSION='1.7.0beta'
ac_ct_CC='/opt/local/bin/clang-mp-16'
ac_ct_CXX=''
am__fastdepCC_FALSE='#'
am__fastdepCC_TRUE=''
am__fastdepCXX_FALSE='#'
am__fastdepCXX_TRUE=''
am__include='include'
am__isrc=''
am__leading_dot='.'
am__quote=''
am__tar='${AMTAR} chof - "$$tardir"'
am__untar='${AMTAR} xf -'
bindir='${exec_prefix}/bin'
build='i386-apple-darwin14.5.0'
build_alias=''
build_cpu='i386'
build_os='darwin14.5.0'
build_vendor='apple'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='NONE'
host='i386-apple-darwin14.5.0'
host_alias=''
host_cpu='i386'
host_os='darwin14.5.0'
host_vendor='apple'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
install_sh='$(SHELL) /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_R_R-rsbml/R-rsbml/work/rsbml/inst/SBML_odeSolver-1.7.0beta/config/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mkdir_p='$(top_builddir)/config/install-sh -c -d'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_R_R-rsbml/R-rsbml/work/rsbml/local'
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
sysconfdir='${prefix}/etc'
target_alias=''

## ----------- ##
## confdefs.h. ##
## ----------- ##

#define PACKAGE_NAME "odeSolver"
#define PACKAGE_TARNAME "SBML_odeSolver"
#define PACKAGE_VERSION "1.7.0beta"
#define PACKAGE_STRING "odeSolver 1.7.0beta"
#define PACKAGE_BUGREPORT "{raim,xtof}@tbi.univie.ac.at"
#define PACKAGE "SBML_odeSolver"
#define VERSION "1.7.0beta"
#define SHAREDLIBEXT ".dylib"

configure: exit 1
