bssbsb                  BSS/BSB backcross data
chiasma                 Estimate chiasma distribution from crossover
                        counts
coincidence             Estimate coincidence function
convertxoloc            Convert format of crossover locations data
countxo                 Estimate number of crossovers
distance.given.two      Distance between crossovers given there are two
est.coi                 Estimate the coincidence function
est.coi.um              Estimate the coincidence as a function of
                        micron distance
est.recrate             Estimate recombination rate
find.breaks             Estimate crossover locations
first.given.two         Location of first crossover given there are two
firstden                Distance to a crossover
fitGamma                Fit Gamma model
fitStahl                Fit Stahl model
gammacoi                Coincidence function for the gamma model
intensity               Estimate intensity function
ioden                   Distance between crossovers
joint.given.two         Crossover locations given there are two
kfunc                   estimate Ripley's K function
location.given.one      Location of crossover given there is one
recrate2scanone         Convert recrate to scanone format
simStahl                Simulate crossover locations under the Stahl
                        model
stahlLoglik             Calculate log likelihood for Stahl model
stahlcoi                Coincidence function for the Stahl model
xoiversion              Installed version of R/xoi
xoprob                  Distribution of number of crossovers
