gclib for Debian
================

The final target which needs gclib is gffread.  This build the files

  GBase.cpp
  GArgs.cpp
  GFaSeqGet.cpp
  gdna.cpp
  codons.cpp
  gff.cpp
  GStr.cpp
  GFastaIndex.cpp
  gff_utils.cpp

To build proper libraries some rudimentary automake code was added as
quilt patch.  Since the gclib source contains more C++ code that might
be useful as well all those C++ file except the tests and the following
source files are built and included into the library:

  GBam.cpp:  This needs bam.h and sam.h while it needs to be clarified
             from what project these header files are used
  gdimg.cpp: This would introduce an unneeded dependency from libgd-dev


FIXME: I tried to build mdtest but linking it against the just build
library does not work the way I tried.  Some hint from someone who
knows automake better than me might be helpful.


 -- Andreas Tille <tille@debian.org>  Thu, 18 Apr 2019 12:54:42 +0200
