BLASTP 2.0.11 [Jan-20-2000]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|1718062|sp|P16153|UTXA_CLODI UTXA PROTEIN
         (166 letters)

Database: data/swissprot
           82,258 sequences; 29,652,561 total letters

Searching..................................................done

>gi|1718062|sp|P16153|UTXA_CLODI UTXA PROTEIN
           Length = 166
           
 Score =  332 bits (843), Expect = 2e-91
 Identities = 166/166 (100%), Positives = 166/166 (100%)

Query: 1   MHSSSPFYISNGNKIFFYINLGGVMNMTISFLSEHIFIKLVILTISFDTLLGCLSAIKSR 60
           MHSSSPFYISNGNKIFFYINLGGVMNMTISFLSEHIFIKLVILTISFDTLLGCLSAIKSR
Sbjct: 1   MHSSSPFYISNGNKIFFYINLGGVMNMTISFLSEHIFIKLVILTISFDTLLGCLSAIKSR 60

Query: 61  KFNSSFGIDGGIRKVAMIACIFFLSVVDILTKFNFLFMLPQDCINFLRLKHLGISEFFSI 120
           KFNSSFGIDGGIRKVAMIACIFFLSVVDILTKFNFLFMLPQDCINFLRLKHLGISEFFSI
Sbjct: 61  KFNSSFGIDGGIRKVAMIACIFFLSVVDILTKFNFLFMLPQDCINFLRLKHLGISEFFSI 120

Query: 121 LFILYESVSILKNMCLCGLPVPKRLKEKIAILLDAMTDEMNAKDEK 166
           LFILYESVSILKNMCLCGLPVPKRLKEKIAILLDAMTDEMNAKDEK
Sbjct: 121 LFILYESVSILKNMCLCGLPVPKRLKEKIAILLDAMTDEMNAKDEK 166


>gi|140528|sp|P24811|YQXH_BACSU HYPOTHETICAL 15.7 KD PROTEIN IN
           SPOIIIC-CWLA INTERGENIC REGION (ORF2)
           Length = 140
           
 Score = 39.5 bits (90), Expect = 0.004
 Identities = 27/130 (20%), Positives = 55/130 (41%), Gaps = 19/130 (14%)

Query: 37  FIKLVILTISFDTLLGCLSAIKSRKFNSSFGIDGGIRKVAMIACIFFLSVVDILTKFNFL 96
           ++ L+++    D L G + A K +K  S     G +RK+     +   +V+D +   N  
Sbjct: 26  YLDLLLVLSIIDVLTGVIKAWKFKKLRSRSAWFGYVRKLLNFFAVILANVIDTVLNLN-- 83

Query: 97  FMLPQDCINFLRLKHLGISEFFSILF-ILYESVSILKNMCLCGLPVPKRLKEKIAILLDA 155
                           G+  F ++LF I  E +SI +N+   G+ +P  + +++  + + 
Sbjct: 84  ----------------GVLTFGTVLFYIANEGLSITENLAQIGVKIPSSITDRLQTIENE 127

Query: 156 MTDEMNAKDE 165
                N  D+
Sbjct: 128 KEQSKNNADK 137


>gi|141088|sp|P26835|YNGD_CLOPE HYPOTHETICAL 14.9 KD PROTEIN IN NAGH
           3'REGION (ORFD)
           Length = 132
           
 Score = 38.7 bits (88), Expect = 0.007
 Identities = 24/110 (21%), Positives = 52/110 (46%), Gaps = 18/110 (16%)

Query: 41  VILTISFDTLLGCLSAIKSRKFNSSFGIDGGIRKVAMIACIFFLSVVD-ILTKFNFLFML 99
           +++ I  D L G +   KS++  S+ G+ G  +K  ++  +    ++D +L    ++F  
Sbjct: 33  LLVFIFLDYLTGVIKGCKSKELCSNIGLRGITKKGLILVVLLVAVMLDRLLDNGTWMFRT 92

Query: 100 PQDCINFLRLKHLGISEFFSILFILYESVSILKNMCLCGLPVPKRLKEKI 149
                              +  +I+ E +SIL+N    G+P+P++LK+ +
Sbjct: 93  -----------------LIAYFYIMNEGISILENCAALGVPIPEKLKQAL 125


>gi|6014830|sp|O78935|CYB_MARAM CYTOCHROME B
           Length = 379
           
 Score = 29.3 bits (64), Expect = 4.6
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

Query: 80  CIFFLSVVDILTKFNFLFMLPQDCINFLRLKHLGISEFFSILFILYESVSILKNMCL 136
           C+F+L V D+LT   ++   P +   F+ +  L    +F+IL IL  ++SI++N  L
Sbjct: 323 CLFWLLVADLLT-LTWIGGQPVEH-PFITIGQLASILYFAILLILMPAISIIENNLL 377


>gi|1351589|sp|P47694|Y456_MYCGE HYPOTHETICAL PROTEIN MG456
           Length = 334
           
 Score = 29.0 bits (63), Expect = 6.0
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 90  LTKFNFLFMLPQDCINFLRLKHLGISEFFSILFILYESVSILKN 133
           LTKFN  F+ P     FLR+  +G+   FS++ I +   S  +N
Sbjct: 4   LTKFNKFFLTPNKLNAFLRV--IGLCGLFSVIAISFGIYSYTRN 45


>gi|2496246|sp|Q57881|Y439_METJA HYPOTHETICAL ATP-BINDING PROTEIN
           MJ0439
           Length = 361
           
 Score = 28.6 bits (62), Expect = 7.8
 Identities = 19/56 (33%), Positives = 30/56 (52%), Gaps = 12/56 (21%)

Query: 106 FLRLKHLGIS---EFFSILFILYES----VSILKNMC-----LCGLPVPKRLKEKI 149
           ++ L+ + IS   +F  +LF  YE     V I+K++      LCG+P PK   E+I
Sbjct: 68  YINLRGIFISKYKDFIEVLFEEYEEDRKPVEIIKSLIKDVPSLCGIPTPKNTLEEI 123


  Database: data/swissprot
    Posted date:  Feb 2, 2000  9:39 AM
  Number of letters in database: 29,652,561
  Number of sequences in database:  82,258
  
Lambda     K      H
   0.331    0.146    0.428 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8801581
Number of Sequences: 82258
Number of extensions: 320828
Number of successful extensions: 892
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 888
Number of HSP's gapped (non-prelim): 6
length of query: 166
length of database: 29,652,561
effective HSP length: 46
effective length of query: 120
effective length of database: 25,868,693
effective search space: 3104243160
effective search space used: 3104243160
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.9 bits)
S2: 62 (28.6 bits)
