| CBitString(EAlphabet alpha, int32_t width=1) | CBitString | |
| cleanup() | CBitString | |
| condense(uint64_t bits, uint64_t mask) const | CBitString | |
| CSGObject() | CSGObject | |
| CSGObject(const CSGObject &orig) | CSGObject | |
| get_length() const | CBitString | |
| get_name() const | CBitString | [virtual] |
| io | CSGObject | |
| load_fasta_file(const char *fname, bool ignore_invalid=false) | CBitString | |
| obtain_from_char(char *str, uint64_t len) | CBitString | |
| operator[](uint64_t index) const | CBitString | |
| parallel | CSGObject | |
| ref() | CSGObject | |
| ref_count() const | CSGObject | |
| set_string(uint64_t *str, uint64_t len) | CBitString | |
| unref() | CSGObject | |
| version | CSGObject | |
| ~CBitString() | CBitString | |
| ~CSGObject() | CSGObject | [virtual] |