cogent3-2021.10.12a1.dist-info/INSTALLER,sha256=91a475e3f8891fc45b7eb71b7c504ae31111b86ae04524763ab0e91f97f6f8df,4
cogent3-2021.10.12a1.dist-info/METADATA,sha256=4fcdd494779f4c9a09ce3262bff60d883f168d86e6e632e45f0ade60be5e490b,9731
cogent3-2021.10.12a1.dist-info/REQUESTED,sha256=e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855,0
cogent3/__init__.py,sha256=56ba4a1c137ad6e76bf35ce301557843eb196446cb9552c3c3e5730cea69e30d,16836
cogent3/__pycache__/__init__.cpython-39.pyc,,
cogent3/align/__init__.py,sha256=fe3a431488e1830af9d26a9ee10aaaab91b23a0abc00bf8979381d9419349706,661
cogent3/align/__pycache__/__init__.cpython-39.pyc,,
cogent3/align/__pycache__/align.cpython-39.pyc,,
cogent3/align/__pycache__/compare_numba.cpython-39.pyc,,
cogent3/align/__pycache__/dp_calculation.cpython-39.pyc,,
cogent3/align/__pycache__/indel_model.cpython-39.pyc,,
cogent3/align/__pycache__/indel_positions.cpython-39.pyc,,
cogent3/align/__pycache__/pairwise.cpython-39.pyc,,
cogent3/align/__pycache__/pairwise_pogs_numba.calc_rows-17.py39.1.nbc,sha256=0304632989eae64d716f4c6fafbe9b22fc1442c6fdc1c09d1f1521392da28bb8,320382
cogent3/align/__pycache__/pairwise_pogs_numba.calc_rows-17.py39.nbi,sha256=f552bd1e5c20a6b1063c41e5c04c0a079ca8a8f9c87e40f7266aa64014193df6,1704
cogent3/align/__pycache__/pairwise_pogs_numba.cpython-39.pyc,,
cogent3/align/__pycache__/pairwise_seqs_numba.calc_rows-17.py39.1.nbc,sha256=46a964d80a4de9fd5ba86adae2d866570ca61caa206c384295dbbe57b73dc0b1,263845
cogent3/align/__pycache__/pairwise_seqs_numba.calc_rows-17.py39.nbi,sha256=3f8f2bc391145b9e365f94aaacaa1e648a47ad20d42b2434a136b73c53cf41d1,1704
cogent3/align/__pycache__/pairwise_seqs_numba.cpython-39.pyc,,
cogent3/align/__pycache__/pycompare.cpython-39.pyc,,
cogent3/align/__pycache__/traceback.cpython-39.pyc,,
cogent3/align/align.py,sha256=a1ee2d2b63127fccc640256adf7b760358c75ac422be18a0624ef23ba14b13b7,3410
cogent3/align/compare_numba.py,sha256=ba5ecd37abc2b43ddaed27c3079458dcbfc8dcc446d3e87928476533addef35a,1326
cogent3/align/dp_calculation.py,sha256=0f4b67d77f471e33b3215c916818efb50a5748add35e09e9dbd2f1be908a3430,6144
cogent3/align/indel_model.py,sha256=95e2cf76bf076ddc466ee58c498f6f09158879da7b30825698961e529e9e23e8,3815
cogent3/align/indel_positions.py,sha256=7e084cc15223a98a2bc9ad5ec2610514cb71d268a9c8485ad9fe17b944afc7cd,8125
cogent3/align/pairwise.py,sha256=f6043253230d08e972edc48523235213ebf1ab5f9dc57912bf30b4dfbfb2c555,39280
cogent3/align/pairwise_pogs_numba.py,sha256=1a9bfa573b55686d413ed68318579649ce1bc6a0f2974628c8a62b8e290a1423,11257
cogent3/align/pairwise_seqs_numba.py,sha256=e327c453a07a3b7b8d6162b13b75400be4c081e7c93947467dd55515fc6a3796,9062
cogent3/align/progressive.py,sha256=a2c4846a6c08e4a61906648b6638af19c8480f21627236ee836eafc14d2a7336,3984
cogent3/align/pycompare.py,sha256=8812b5bff0e4f545d530bbdfe423272ff7333a71955c622e8770c74f3bea4446,1459
cogent3/align/traceback.py,sha256=5712a8d8730f7437f20e4d0f9efa6b1263d620b074d64d211327dfe843a8191d,2895
cogent3/app/__init__.py,sha256=8a083ebd479e5281cc3d3b500c8b20b00e186a258794862d50da780b474afc98,1981
cogent3/app/__pycache__/__init__.cpython-39.pyc,,
cogent3/app/__pycache__/data_store.cpython-39.pyc,,
cogent3/app/align.py,sha256=9f3911b532fb8b53e669ec3cc3495412e5282dd2703b3f55ce4c1c69f98ec0dc,17756
cogent3/app/composable.py,sha256=fea307670a89c313b6725c71bc67e91ff53abebb286e91f36460313d19f04e58,24517
cogent3/app/data_store.py,sha256=977783c479a76de2d96c9afb8908a71facf08724ee49f07d555adab8616a71f1,33809
cogent3/app/dist.py,sha256=21afe1326f85204a25961423e5b6d5da857a250effcdad8da515c7b6f1101eac,4775
cogent3/app/evo.py,sha256=6f4913e5951123bb3463f04f6e0dd91cf85b45eea9a997bf4a96f3c0061015b6,38280
cogent3/app/io.py,sha256=9b1ba6dc0850b926b2252cc951ed2033fb89aade368dc9b9a81da959e2498284,18992
cogent3/app/result.py,sha256=1d36f2d66633ee25e593d5f43524a78fd006cd9d69aea314ae56c72f6a290cc2,19734
cogent3/app/sample.py,sha256=94afd8e5dc1046fb5a1e9d2e29bd6c06f6d07dcb2948c231a0de53a211710f5a,26368
cogent3/app/translate.py,sha256=0d7ee9cbcc777b18289415ac9b7856ddd7d3fb1d5c48c665960ea0b77073d74c,9338
cogent3/app/tree.py,sha256=93d9773930073525f442762ba9e29ff6e0caa23e1311bcaf8f0e31e021228a1a,5291
cogent3/cluster/UPGMA.py,sha256=9cd07cf7744f99245c321f4d358f068771ba2b561defe4182dd6af7f0da9f698,6008
cogent3/cluster/__init__.py,sha256=dda3b30ac197f78f3b29eaa877bc5412e735b99834d88641cea67b89a4b8dd27,404
cogent3/core/__init__.py,sha256=fe8106cb7b1a1c279ea8fad37d5f1b216bbd7954438ed6d437d149fc926efb3a,583
cogent3/core/__pycache__/__init__.cpython-39.pyc,,
cogent3/core/__pycache__/alignment.cpython-39.pyc,,
cogent3/core/__pycache__/alphabet.cpython-39.pyc,,
cogent3/core/__pycache__/annotation.cpython-39.pyc,,
cogent3/core/__pycache__/genetic_code.cpython-39.pyc,,
cogent3/core/__pycache__/info.cpython-39.pyc,,
cogent3/core/__pycache__/location.cpython-39.pyc,,
cogent3/core/__pycache__/moltype.cpython-39.pyc,,
cogent3/core/__pycache__/profile.cpython-39.pyc,,
cogent3/core/__pycache__/sequence.cpython-39.pyc,,
cogent3/core/__pycache__/tree.cpython-39.pyc,,
cogent3/core/alignment.py,sha256=52e2f518746757c14097ff0750c9c01f269355758d68c193f65e3f193a28975d,167743
cogent3/core/alphabet.py,sha256=6e052c1e5c5cb23a097ebe842ad407b2876bcc6d7b6eb3e79ce372ebd5170373,33394
cogent3/core/annotation.py,sha256=13333a7d01520255db5e5cd995916d343da5a4d0995dbd202827d65421d343ba,17325
cogent3/core/genetic_code.py,sha256=f72589ea73a1dc86cc4245ea918dceacb130d15276c182f7e0bda4943b9c0b7c,17402
cogent3/core/info.py,sha256=bdc52209bc07b1ff56e34ae97a398b28788412ab5dd1262eb1fd176274af7990,5860
cogent3/core/location.py,sha256=4fc10f57a61315bd8d04ba36630da6e6684451d40f6124e851939d36615c7fe2,35171
cogent3/core/moltype.py,sha256=95fb8d38511aeb17d8c084cb29882629d255ea2fe80ede92563fff7e7ade21dc,47652
cogent3/core/profile.py,sha256=c706afce67cd40cb23199cfa761100ea64802ee2ef159d080fb7238f3786cbb7,18311
cogent3/core/sequence.py,sha256=869ad29549a8066144af4c9a73e0e59b7c074697632521e50ea958d23e67020a,69678
cogent3/core/tree.py,sha256=8b59f77b666161844b67d8f426c355e2ba29a72bc0ca32662364dbb0abb977fb,89939
cogent3/data/__init__.py,sha256=e63f1c1fb10573c31ab6cb8ac713d4f00b1d74d1c0e417538983328d386a7910,345
cogent3/data/__pycache__/__init__.cpython-39.pyc,,
cogent3/data/__pycache__/molecular_weight.cpython-39.pyc,,
cogent3/data/energy_params.py,sha256=f80385246b175842b61518e70bf66eb682bd189f7fb7331cde7818bbebdf15c3,3312
cogent3/data/molecular_weight.py,sha256=290026b2d288766aa6719c6c93910341f121a94fe19c9c1a5cb486317d6a7667,1842
cogent3/draw/__init__.py,sha256=4cc1277a86a00e349d841fe2525781c7b1ae5881e05d6fc93bf70a938b6a49e3,424
cogent3/draw/dendrogram.py,sha256=d79ea10260681249c7f59fed4bd31366c0e12d7f8223c550c5b26270d8b7c141,31034
cogent3/draw/dotplot.py,sha256=bd9aecf0c98c4f271bbd4fe12c9693c140e0afecd800487e6ca063cdbb476e64,9687
cogent3/draw/drawable.py,sha256=22a5f3b62ff3012e41543f69eb2b2a7c1b5723131976bf66456834c04772a420,26639
cogent3/draw/letter.py,sha256=9b6208c279e37055b2b030728cc5d6d590a0f70326573ff7c40ff7b4a181294d,49216
cogent3/draw/logo.py,sha256=3a771d789f6771baaa0c71cc4038c94f3ccff88b2d6f83bd076fa7e0cbbe8ed3,4282
cogent3/evolve/__init__.py,sha256=b8b4d58df9e343f2e48f1146703afbed0c9d6c7e81b8dd35200b17aae22ec225,744
cogent3/evolve/__pycache__/__init__.cpython-39.pyc,,
cogent3/evolve/__pycache__/discrete_markov.cpython-39.pyc,,
cogent3/evolve/__pycache__/fast_distance.cpython-39.pyc,,
cogent3/evolve/__pycache__/likelihood_calculation.cpython-39.pyc,,
cogent3/evolve/__pycache__/likelihood_function.cpython-39.pyc,,
cogent3/evolve/__pycache__/likelihood_tree.cpython-39.pyc,,
cogent3/evolve/__pycache__/likelihood_tree_numba.cpython-39.pyc,,
cogent3/evolve/__pycache__/models.cpython-39.pyc,,
cogent3/evolve/__pycache__/motif_prob_model.cpython-39.pyc,,
cogent3/evolve/__pycache__/ns_substitution_model.cpython-39.pyc,,
cogent3/evolve/__pycache__/pairwise_distance_numba.cpython-39.pyc,,
cogent3/evolve/__pycache__/parameter_controller.cpython-39.pyc,,
cogent3/evolve/__pycache__/predicate.cpython-39.pyc,,
cogent3/evolve/__pycache__/simulate.cpython-39.pyc,,
cogent3/evolve/__pycache__/solved_models.cpython-39.pyc,,
cogent3/evolve/__pycache__/solved_models_numba.cpython-39.pyc,,
cogent3/evolve/__pycache__/substitution_calculation.cpython-39.pyc,,
cogent3/evolve/__pycache__/substitution_model.cpython-39.pyc,,
cogent3/evolve/best_likelihood.py,sha256=52137a1d5fa2785dfd6d0591b9e4ae71d6110cd7066ebdd8071627f959fa7825,4797
cogent3/evolve/bootstrap.py,sha256=465fbc9b2973a471c63f0454e92f64cb1b805b2eb648a3454e373936328913ad,7168
cogent3/evolve/coevolution.py,sha256=929cc71ccb1700aef6f89309c8c978e2c764328360ea454c4f9cd02d77274c60,95138
cogent3/evolve/discrete_markov.py,sha256=ed95e9a0d3b5ce89757dc4f6aaa562817c406c9605297df197fee72da2c02577,3496
cogent3/evolve/distance.py,sha256=9021584fa87bb7b3ed54136c8ce0875d8ddce788d59eb80f35d88fcb2127fdc4,13337
cogent3/evolve/fast_distance.py,sha256=83d7b267e09b0c1c62ea5f8bbb62dce6208f6a76f58a49ebb5f057ae71865078,25378
cogent3/evolve/likelihood_calculation.py,sha256=2d969fd003008271360925e63b9c10bdb95451a3ed6cc2761e57ad1a82e51811,9978
cogent3/evolve/likelihood_function.py,sha256=34edc182c55ba4bda91b11409ecff6c5bdfabf2d70b2d9fcb6e52246031a7fbc,42389
cogent3/evolve/likelihood_tree.py,sha256=d85c67ed4c7327372596a60448f78ae1a9a177fad0b6b5494c9425b737fc4e69,10919
cogent3/evolve/likelihood_tree_numba.py,sha256=1b2df0cd664b37cc9729a4fd5b3babed8a77231d395e4c3889232273da7adf0b,1501
cogent3/evolve/models.py,sha256=bfd8bda53667dd702ebb3b2c8fcdefdd16c0bd0b4981ff44ba4db9124fedcf6f,64281
cogent3/evolve/motif_prob_model.py,sha256=a8c424bddbc39c26b34dfc692d6d110d24a8ae725d120106fc0b9e8b7c1a7634,10854
cogent3/evolve/ns_substitution_model.py,sha256=5bb820991bc895a6ca8ba5adbe1e787952720f0e59d7a2050e9d8e60428587e4,7075
cogent3/evolve/pairwise_distance_numba.py,sha256=88177b426486d344aed085663606ea4649e184852d4b7d8448d17c6dd224abd3,848
cogent3/evolve/parameter_controller.py,sha256=f41218be2ddf64eda6e6300ef5a13f17eff57e517a883f5f994f77cb6331d40c,20493
cogent3/evolve/predicate.py,sha256=56e323e2916f84e72ef4767a6d50ac5d4a90a9ce5591c3d907e5699a037c703f,9239
cogent3/evolve/simulate.py,sha256=215778f8e395382075ee1270b29d5bb0a53dc2c1a8cb0f08f1ed2ad4dbbcbf14,5039
cogent3/evolve/solved_models.py,sha256=9b42454780af33c4f858b281580c8daf3cd12c85493da913e3d8372e3eebd9d0,3346
cogent3/evolve/solved_models_numba.py,sha256=cf6e85c5d844f5c89442b08190019679fda7d62aadb80a477154292cf1ac600d,1669
cogent3/evolve/substitution_calculation.py,sha256=57604e27eeee8cdc6cb93375d6d8f8f6d96a55bdf54320163410a3b10a1ee80f,2393
cogent3/evolve/substitution_model.py,sha256=5e113617d61d25cc9667bed2a499008fd1cb302f8880d44e76a61a6863d4b422,37583
cogent3/format/__init__.py,sha256=91bf77692fbcdc20bf538314fedb1de6dc098a51c76e1c9d156350dba0fdb43d,731
cogent3/format/__pycache__/__init__.cpython-39.pyc,,
cogent3/format/__pycache__/alignment.cpython-39.pyc,,
cogent3/format/__pycache__/bedgraph.cpython-39.pyc,,
cogent3/format/__pycache__/fasta.cpython-39.pyc,,
cogent3/format/__pycache__/gde.cpython-39.pyc,,
cogent3/format/__pycache__/nexus.cpython-39.pyc,,
cogent3/format/__pycache__/paml.cpython-39.pyc,,
cogent3/format/__pycache__/phylip.cpython-39.pyc,,
cogent3/format/__pycache__/table.cpython-39.pyc,,
cogent3/format/__pycache__/util.cpython-39.pyc,,
cogent3/format/alignment.py,sha256=cc557c0b2c2c97a55c681f4b18ac0246aa7e515be8f2b62a908586b83f38e105,1908
cogent3/format/bedgraph.py,sha256=4c1a7b5d36e85177f60faac69d2b03f29c085e9cddaf88ca17f88433f15c7fda,5122
cogent3/format/clustal.py,sha256=5528838177477febca0235034526616a260e7eeca97811e86763f807cf45853c,2203
cogent3/format/fasta.py,sha256=92828895637482778b10e7f98457d80dc5f8210c658a908fde34b0ba2782fa21,1727
cogent3/format/gde.py,sha256=4724298810e0faf31d91029f6f09223748027aeec0d1b01c6640c5cd59c873d2,1619
cogent3/format/nexus.py,sha256=a1569e07bdd84e515cd1896a940076f9047e9bfe2b8671098bf3d5cb8cf800f6,1346
cogent3/format/paml.py,sha256=a499816db6ff3994562ca2656129b0de0707738ad8ca65d273dd9ebb2c4b8cac,1695
cogent3/format/phylip.py,sha256=73cb64daa956caf1135129036bbf1787eb4d12c3f44ec775f531ff3f4d6395ed,2222
cogent3/format/table.py,sha256=37cd8e249702559c5a433d080857a3f981d9a5a7e522a179a019f23e210f9360,31886
cogent3/format/util.py,sha256=faca7823381e522c85b15e2b97fc9a001d10d0e95fbe77503ae5f0ab4078e324,3226
cogent3/maths/__init__.py,sha256=39a4948e8146d55ca47c527cd8cbe72c5420ff27e6d8c16b6af43c1b25e338cd,704
cogent3/maths/__pycache__/__init__.cpython-39.pyc,,
cogent3/maths/__pycache__/markov.cpython-39.pyc,,
cogent3/maths/__pycache__/matrix_exponential_integration.cpython-39.pyc,,
cogent3/maths/__pycache__/matrix_exponentiation.cpython-39.pyc,,
cogent3/maths/__pycache__/matrix_logarithm.cpython-39.pyc,,
cogent3/maths/__pycache__/measure.cpython-39.pyc,,
cogent3/maths/__pycache__/optimisers.cpython-39.pyc,,
cogent3/maths/__pycache__/scipy_optimisers.cpython-39.pyc,,
cogent3/maths/__pycache__/scipy_optimize.cpython-39.pyc,,
cogent3/maths/__pycache__/simannealingoptimiser.cpython-39.pyc,,
cogent3/maths/__pycache__/solve.cpython-39.pyc,,
cogent3/maths/__pycache__/util.cpython-39.pyc,,
cogent3/maths/distance_transform.py,sha256=746022bf255a5b4c0587a4c02f166b35f7dbb629d69f19cbdd6afbcd1383c494,52511
cogent3/maths/geometry.py,sha256=de5da855e8b43c094c8155a3feb69fc53885af7ef6e920d1ba312d2b95aed4e3,6772
cogent3/maths/markov.py,sha256=43f2988e0e7f27147862eee3e830b26820d26c27dc434383ee6025e665ae0b1f,7224
cogent3/maths/matrix_exponential_integration.py,sha256=f23f625694d55ce19351c72044e1d8d534bf07638929d2ddf102ae6508cc78af,3467
cogent3/maths/matrix_exponentiation.py,sha256=670a57880ce6581d48f381307a0022d1cdc1f16c9d83e1e5596275f511aac72d,4751
cogent3/maths/matrix_logarithm.py,sha256=0a55e2ad1828219bec15bb9122d0f29c03679544f710f98eaeb08b0fa40877ff,3907
cogent3/maths/measure.py,sha256=e806de720f692b6eabcb462355cd6fe48e0df275e67a1e68f01a4898f1fe092a,4115
cogent3/maths/optimisers.py,sha256=d01a2dc7e8122a29e26a272f7d95eb2fcfffa02ebddc7fa030b22d2fb774142b,6592
cogent3/maths/period.py,sha256=6d6b6c85969b007cddc452c02607920564677c2d9082ddd6eeb0f20ed93eee1c,8779
cogent3/maths/period_numba.py,sha256=9fdd03c174a0a689452ea8d2f97b5f4e8f3ca32bab28c24005d2a572f3f56ce7,1484
cogent3/maths/scipy_optimisers.py,sha256=720a167a54869f154061eaa273eb77d70bc1526887880156184d76bd7009fde0,3579
cogent3/maths/scipy_optimize.py,sha256=7ecea849b1cb3b0c0587ec5bd65508041d659874950fd60cfb2e79ef4ca3da05,16787
cogent3/maths/simannealingoptimiser.py,sha256=375bae086bc0bdd16cdf14d9306af90d5e4a410cb76cccdf1f4a50730842471b,9367
cogent3/maths/solve.py,sha256=56d886d8054444508af4a84cca7f8c50d8fa97a742be330a1d436d79faf6f98b,4149
cogent3/maths/stats/__init__.py,sha256=00042b6f39c0462a2168e0b77140707549021ff19eeff8506f917b58d211122a,722
cogent3/maths/stats/__pycache__/__init__.cpython-39.pyc,,
cogent3/maths/stats/__pycache__/contingency.cpython-39.pyc,,
cogent3/maths/stats/__pycache__/distribution.cpython-39.pyc,,
cogent3/maths/stats/__pycache__/information_criteria.cpython-39.pyc,,
cogent3/maths/stats/__pycache__/kendall.cpython-39.pyc,,
cogent3/maths/stats/__pycache__/ks.cpython-39.pyc,,
cogent3/maths/stats/__pycache__/number.cpython-39.pyc,,
cogent3/maths/stats/__pycache__/special.cpython-39.pyc,,
cogent3/maths/stats/__pycache__/test.cpython-39.pyc,,
cogent3/maths/stats/contingency.py,sha256=75e53cc6fbfb1907abf0f7701b60714c96a5e2e4394095f5e865a943a5bbb930,13505
cogent3/maths/stats/distribution.py,sha256=d658298f8026b89b9ec87ab144282c0aa4c1362a898336b057f05a05eef3543c,15404
cogent3/maths/stats/information_criteria.py,sha256=4a5895da2d4f44eeb4597a1aa58b4fbc57fe9e9e1cadc8ffb3d200585095eb9d,1107
cogent3/maths/stats/jackknife.py,sha256=b5c10af8d862a7b2f1fea8378cb1f194fba45fb1e5b4e94f3ee9daec37bc0e8e,6214
cogent3/maths/stats/kendall.py,sha256=8d48739cc57258db50a2854faa3d392847a3a034567f161d39d37f5445cc00d8,3719
cogent3/maths/stats/ks.py,sha256=8696817b803e2664cbc9a08cbadaf99a669ef5a76652f469df76630049bd2d5a,3826
cogent3/maths/stats/number.py,sha256=147cca8a227aebc63e9f3fa1a5f207dd7821f48b7469cead4f38c617a5c1ccd9,11922
cogent3/maths/stats/period.py,sha256=e487a03ca12328b7ad47bca84fda0f8553bdc3093b8ceecc9fd0186aaf8be68f,7103
cogent3/maths/stats/special.py,sha256=87b81cff021037343752d42d8e06ec8b56c16d5b9a40efa50c88ae88a933e633,33133
cogent3/maths/stats/test.py,sha256=7beadb3c5e82c4e9a6cdb476efb096113e896fbfad172998056ec238a929a6be,63916
cogent3/maths/util.py,sha256=1dfdb2237e0d11e3e951fda75b11620eb0df1361ebf2a9899a41888c0af71355,8182
cogent3/parse/__init__.py,sha256=17362f68e4eb48e3d691edb759bc350fd90f7cecc859399e3eaf115eb36210be,957
cogent3/parse/__pycache__/__init__.cpython-39.pyc,,
cogent3/parse/__pycache__/clustal.cpython-39.pyc,,
cogent3/parse/__pycache__/cogent3_json.cpython-39.pyc,,
cogent3/parse/__pycache__/fasta.cpython-39.pyc,,
cogent3/parse/__pycache__/gbseq.cpython-39.pyc,,
cogent3/parse/__pycache__/gcg.cpython-39.pyc,,
cogent3/parse/__pycache__/genbank.cpython-39.pyc,,
cogent3/parse/__pycache__/gff.cpython-39.pyc,,
cogent3/parse/__pycache__/newick.cpython-39.pyc,,
cogent3/parse/__pycache__/nexus.cpython-39.pyc,,
cogent3/parse/__pycache__/paml.cpython-39.pyc,,
cogent3/parse/__pycache__/phylip.cpython-39.pyc,,
cogent3/parse/__pycache__/record.cpython-39.pyc,,
cogent3/parse/__pycache__/record_finder.cpython-39.pyc,,
cogent3/parse/__pycache__/sequence.cpython-39.pyc,,
cogent3/parse/__pycache__/table.cpython-39.pyc,,
cogent3/parse/__pycache__/tinyseq.cpython-39.pyc,,
cogent3/parse/__pycache__/tree_xml.cpython-39.pyc,,
cogent3/parse/blast.py,sha256=fbb1623a34c01bb2a22702be5cbc4b43ec65d9a1a81f22efecce2dccdc5bbbea,11645
cogent3/parse/blast_xml.py,sha256=74bc9d31f05cf1e163c6ae9a469f5aa54518ceb5a2375a6922fa55a998f8f0a6,10002
cogent3/parse/cigar.py,sha256=5b1197c32d5e1bc2c933857b614e6773e4123f818b1869630e14ba66c36c53f0,5063
cogent3/parse/cisbp.py,sha256=02dc136fcf96b005ec70c3527eb600dd064b4acddb6575bef27cbbefd2707cf3,1129
cogent3/parse/clustal.py,sha256=425276bd1831e8c06c5f816eb1233131aba529bd49668697dd2ec3f13ed3d982,3458
cogent3/parse/cogent3_json.py,sha256=b31cc0595942f5dc03c6093d027962cace26b66cca8dc360b824d826ae173262,1591
cogent3/parse/dialign.py,sha256=6e2b673b131ad6fc3871e149d923644b09ab5db7ef1187c5366d166f2af82808,2164
cogent3/parse/ebi.py,sha256=2057d02fc2b148ccaaaf9e31a3e46ab7556801913721d41b53679e42dd83ee83,58796
cogent3/parse/fasta.py,sha256=a401b0698bbad40cf8ea8d281f2e40a90b39d722fefd4f68fa80d7307e463fe9,9958
cogent3/parse/gbseq.py,sha256=9e5c37aec60743bb71a978d2dfd644bbe8381dd6d1904296af0acfec5903d230,4447
cogent3/parse/gcg.py,sha256=3fdd58fbe924f4f1262fbeb6ac0f2393c37555ca79fceb8e52d0b363cb3e2331,1740
cogent3/parse/genbank.py,sha256=cd07d12da1b9db7ef42e7a2a84b4171f5e8b8b8d9b11c392d9c48f665147d65e,22497
cogent3/parse/gff.py,sha256=01a54a2f4ace7b62debb13bac1121294e77b6a5be196541cd901008be19631ff,3704
cogent3/parse/greengenes.py,sha256=4df647aa400fd8cba0a5c71c10ddcba665b40e4e5d8c131f09093a85eee889af,2846
cogent3/parse/jaspar.py,sha256=e2f8c7d85011ce344a89e6e3e5cba59ece8d204b41458136719f0454dcff9a4b,1256
cogent3/parse/locuslink.py,sha256=6a99102e56f3ba2be7fb728631dbc66c9398ff95561479478be93b6e923fc99b,10510
cogent3/parse/ncbi_taxonomy.py,sha256=40f775d1f8f7d9ff9bb04b71db8ed44ade75a3dd113a6b02b35f3f0c5c095e12,9261
cogent3/parse/newick.py,sha256=c5f80f6a7aac7b42144c994dac896625e1af202084d27ad3967857c87d194164,7157
cogent3/parse/nexus.py,sha256=30d49f451561e57defcc3f113e3fb9501f363b76a4114e97924421368aa9f9a1,7284
cogent3/parse/paml.py,sha256=16e4eae07a23c6b3f71085f9fff090aec945fbbbc28f73eb4496228f4f07e776,1064
cogent3/parse/paml_matrix.py,sha256=caa6aea5347122e879d68eb07328592bc1e10c63ec88476089286035ec078abe,1517
cogent3/parse/phylip.py,sha256=e0489d131c057b976d3b445708234eafd165a0b8a57944f985c53f299fd5365b,3945
cogent3/parse/psl.py,sha256=a0fa60887802a68d1c454217639f892442b68ac203e9b48560fc33854da2f048,2059
cogent3/parse/rdb.py,sha256=3778939a014da54614feb4a8c375adc2e2d08308f8b7fbd8d4c1e46bd1f2813f,5320
cogent3/parse/record.py,sha256=5f3cac8f500081e8808e2c81c20e53b4035811d86f617b4f66741b28f1632efa,20525
cogent3/parse/record_finder.py,sha256=8cefa129b373ac89b4c0d6970a81efd3bd4c7f7dcd61e341ee2a4b63fef21e31,6823
cogent3/parse/sequence.py,sha256=d5cb254fe7682d7697c81ddb67162eefb7175f83f56b2718dd15c5343f7990ab,3165
cogent3/parse/table.py,sha256=a670aa4847b421c85e97974a486c4ca4c04531294710b8b5c8704279f9f7bb86,5432
cogent3/parse/tinyseq.py,sha256=e94ae487847928ca9e71810ee493b3d8d2dd45aea619fbff55662f0d4f3f0539,2485
cogent3/parse/tree.py,sha256=19aa7134dfc3ec20300107500d997190a6dec1cf852c697aff3563f1ce944e3b,6350
cogent3/parse/tree_xml.py,sha256=399dc45686ab289ab5067f58210ddbba25dadab925c70fb240f7ce4c1469cc7b,2660
cogent3/parse/unigene.py,sha256=dbdcf2597131dbe369a9d40d1da469333e64d59e795a56934cbcbde15977fb01,4256
cogent3/phylo/__init__.py,sha256=2703156cd2950d761b8ad1eba54d838fde290a5438f8af5824816291cbd7a4e4,412
cogent3/phylo/consensus.py,sha256=2495608ec37368b4c7fa9af3d38f08b94cebe1de183cc0fbf4f5fec57d9e8e25,10622
cogent3/phylo/least_squares.py,sha256=55ddd0fbcec1ca963aa8c80f92e7c7b2806959f3845756486dc61dff55d04821,3358
cogent3/phylo/maximum_likelihood.py,sha256=0212968af1dccdefaa847be31c0f78b3bb451fc767a491546a7a21de196bec96,2547
cogent3/phylo/nj.py,sha256=53a1e3f5548a8b786408603cba3fa63aa590dc276b7aa84a9bf9ebb403ec1d6d,9797
cogent3/phylo/tree_collection.py,sha256=5cf8c32a8618c0429255d2c8463a27effa5dfb19c52f215a6df3f60ffff08647,5414
cogent3/phylo/tree_space.py,sha256=f8334b4f16a5be119a6969402503e8ae7707791aa86127541b90c0dd69f1488e,9845
cogent3/phylo/util.py,sha256=93a5caa00a97deae3a80a1829b355a3abae3860bd9001c2d605225563bdf91f0,2868
cogent3/recalculation/__init__.py,sha256=2bbedcc62b0bb63b5a55639acea217e2678c959af33af6cd7f85b1a8b16a764f,357
cogent3/recalculation/__pycache__/__init__.cpython-39.pyc,,
cogent3/recalculation/__pycache__/calculation.cpython-39.pyc,,
cogent3/recalculation/__pycache__/definition.cpython-39.pyc,,
cogent3/recalculation/__pycache__/scope.cpython-39.pyc,,
cogent3/recalculation/__pycache__/setting.cpython-39.pyc,,
cogent3/recalculation/calculation.py,sha256=737ea4db073eda29bf54cfaa223a41c900a7c17009438d943083eeec024d53f5,22874
cogent3/recalculation/definition.py,sha256=9366a2e4ba4cf1d55b2ae44e8979197a4fcfb648e3f4b80cd07ea01b76a6e27e,22077
cogent3/recalculation/scope.py,sha256=8fbd0c0660553c20f9ebf0926a89e5d0a5f5d87d0d2a60de21015692f2cab008,30598
cogent3/recalculation/setting.py,sha256=19b77b392e4409373cb309fbf115ec04ab0c118fbfe88df2a048e2cb84bd2bf6,2949
cogent3/util/__init__.py,sha256=0e48164ab6b1afa5f74aa7579ebf003568a57a13caa7e90ba5905c324268fddd,685
cogent3/util/__pycache__/__init__.cpython-39.pyc,,
cogent3/util/__pycache__/checkpointing.cpython-39.pyc,,
cogent3/util/__pycache__/deserialise.cpython-39.pyc,,
cogent3/util/__pycache__/dict_array.cpython-39.pyc,,
cogent3/util/__pycache__/misc.cpython-39.pyc,,
cogent3/util/__pycache__/parallel.cpython-39.pyc,,
cogent3/util/__pycache__/progress_display.cpython-39.pyc,,
cogent3/util/__pycache__/table.cpython-39.pyc,,
cogent3/util/__pycache__/transform.cpython-39.pyc,,
cogent3/util/__pycache__/union_dict.cpython-39.pyc,,
cogent3/util/__pycache__/warning.cpython-39.pyc,,
cogent3/util/checkpointing.py,sha256=942d2d9ea4f6543a7cf8afd48b019fecdfa58066c64092a4eb0f430f41df1718,1520
cogent3/util/deserialise.py,sha256=9f90f8f509ead508f2bf97d60de6fa2c629a16d74a5698117301e9213fb1ab87,10180
cogent3/util/dict_array.py,sha256=c7442255c304e00ab0bca0eb6a8076b14fe65488c0bbce6dac0a8c1b8b05412c,19893
cogent3/util/misc.py,sha256=53d39de2313587c38f6851728191e2a5f97f0bb70973c084870d2a1cf4ad8c81,40023
cogent3/util/parallel.py,sha256=cfead2c384cd669af9182f6c93e287fcdb9c34a6c269ffafcd1fd893492346c6,5576
cogent3/util/progress_display.py,sha256=e59d81bb129f80443d8aa63d2d946a849d9a50acce7faf64776fb06907b36c5f,6774
cogent3/util/recode_alignment.py,sha256=d3ed8b1480793213cb92a214eeedeaef619a6e3ee4854aba2abd2c244780487b,16572
cogent3/util/table.py,sha256=a7b72721d88d68909bdf261a5efa428e7cb62918411495c425d7d3c33b0865dd,69970
cogent3/util/transform.py,sha256=6185cc319206026c62c0cf51a7deaa595c57d5668660e8f45e92f192276aea29,3678
cogent3/util/union_dict.py,sha256=7d2890ddfe9c52021f37fed768fadc20b83c299603616ed9f81de9301fa42050,3421
cogent3/util/warning.py,sha256=0178dbac01fb440e3baa767b6f43c65574147e62d640e6ca56d9d22a6a6efe7f,1914
cogent3-2021.10.12a1.dist-info/RECORD,,
