java.lang.Object
- org.jmol.shape.Shape
- - org.jmol.shape.MeshCollection
  - - org.jmol.shapesurface.Isosurface
    - - org.jmol.shapesurface.LcaoCartoon

All Implemented Interfaces:

MeshDataServer, VertexDataServer
```
public class LcaoCartoon
extends Isosurface
```

Field Summary

Fields
Modifier and Type	Field	Description
`private java.lang.Object`	`cappingObject`
`private java.lang.String`	`fullCommand`
`(package private) boolean`	`isLonePair`
`private boolean`	`isMolecular`
`(package private) boolean`	`isRadical`
`private java.lang.Integer`	`lcaoColorNeg`
`private java.lang.Integer`	`lcaoColorPos`
`private java.lang.String`	`lcaoID`
`private java.lang.Float`	`lcaoScale`
`private boolean`	`lcaoTranslucent`
`private float`	`lcaoTranslucentLevel`
`private int`	`myColorPt`
`private javajs.util.V3`	`rotationAxis`
`private java.lang.Object`	`slabbingObject`
`private BS`	`thisSet`
`private java.lang.String`	`thisType`

Fields inherited from class org.jmol.shapesurface.Isosurface
allowMesh, iHaveBitSets, jvxlData, keyXy, sg, thisMesh

Fields inherited from class org.jmol.shape.MeshCollection
bsDisplay, colix, color, connections, currentMesh, displayWithinDistance2, displayWithinPoints, explicitID, htObjects, isDisplayWithinNot, isFixed, linkedMesh, meshCount, meshes, modelIndex, nUnnamed, pickedMesh, pickedModel, pickedPt, pickedVertex, PREVIOUS_MESH_ID, previousMeshID, title

Fields inherited from class org.jmol.shape.Shape
bsColixSet, bsSizeSet, isBioShape, ms, myType, RADIUS_MAX, shapeID, translucentAllowed, translucentLevel, vf, vwr

Constructor Summary

Constructors
Constructor Description

LcaoCartoon()

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`private void`	`createLcaoCartoon()`
`private void`	`createLcaoCartoon(int iAtom)`
`private void`	`deleteLcaoCartoon()`
`private void`	`deleteLcaoCartoon(int iAtom)`
`private java.lang.String`	`getID(java.lang.String id, int i)`
`java.lang.String`	`getShapeState()`
`void`	`initShape()`
`void`	`merge(MeshCollection shape)`	called by ParallelProcessor at completion
`private void`	`setLcaoOn(boolean TF)`
`private void`	`setLcaoOn(int iAtom, boolean TF)`
`void`	`setProperty(java.lang.String propertyName, java.lang.Object value, BS bs)`

Methods inherited from class org.jmol.shapesurface.Isosurface
addMeshInfo, addRequiredFile, addTriangleCheck, addVertexCopy, allocMesh, calculateGeodesicSurface, checkObjectClicked, checkObjectHovered, clearSg, discardTempData, fillMeshData, getCapSlabInfo, getCmd, getPlane, getPolygonColorData, getProperty, getPropertyData, getPropI, getShapeDetail, getSurfacePointIndexAndFraction, getValue, invalidateTriangles, newSg, notifySurfaceGenerationCompleted, notifySurfaceMappingCompleted, setOutputChannel, setPropI, setScriptInfo, slabPolygons

Methods inherited from class org.jmol.shape.MeshCollection
checkExplicit, clean, deleteMeshI, deleteMeshKey, getIndexFromName, getMesh, getMeshList, getPickedPoint, getPropDataMC, getPropMC, resetObjects, setModelVisibilityFlags, setPropMC, setStatusPicked, setTokenProperty

Methods inherited from class org.jmol.shape.Shape
appendCmd, checkBoundsMinMax, checkObjectDragged, coordinateInRange, encodeColor, findNearestAtomIndex, getColix, getColixA, getColixB, getColixI, getColorCommand, getColorCommandUnk, getFontCommand, getPropShape, getSize, getSizeG, getTranslucentLabel, initializeShape, initModelSet, replaceGroup, setAtomClickability, setModelSet, setPropS, setShapeSizeRD, setSize, setSizeRD, wasClicked

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

thisType
```
private java.lang.String thisType
```

myColorPt
```
private int myColorPt
```

lcaoID
```
private java.lang.String lcaoID
```

thisSet
```
private BS thisSet
```

isMolecular
```
private boolean isMolecular
```

rotationAxis
```
private javajs.util.V3 rotationAxis
```

lcaoScale
```
private java.lang.Float lcaoScale
```

lcaoTranslucent
```
private boolean lcaoTranslucent
```

lcaoTranslucentLevel
```
private float lcaoTranslucentLevel
```

lcaoColorPos
```
private java.lang.Integer lcaoColorPos
```

lcaoColorNeg
```
private java.lang.Integer lcaoColorNeg
```

isLonePair
```
boolean isLonePair
```

isRadical
```
boolean isRadical
```

cappingObject
```
private java.lang.Object cappingObject
```

slabbingObject

private java.lang.Object slabbingObject

fullCommand
```
private java.lang.String fullCommand
```

Constructor Detail
- LcaoCartoon
```
public LcaoCartoon()
```

Method Detail

initShape
```
public void initShape()
```
Overrides:

initShape in class Isosurface

setProperty

public void setProperty(java.lang.String propertyName,
                        java.lang.Object value,
                        BS bs)

Overrides:: setProperty in class Isosurface

setLcaoOn

private void setLcaoOn(boolean TF)

setLcaoOn

private void setLcaoOn(int iAtom,
                       boolean TF)

deleteLcaoCartoon
```
private void deleteLcaoCartoon()
```

deleteLcaoCartoon

private void deleteLcaoCartoon(int iAtom)

createLcaoCartoon
```
private void createLcaoCartoon()
```

createLcaoCartoon

private void createLcaoCartoon(int iAtom)

getID

private java.lang.String getID(java.lang.String id,
                               int i)

getShapeState
```
public java.lang.String getShapeState()
```
Overrides:

getShapeState in class Isosurface

merge
```
public void merge(MeshCollection shape)
```
Description copied from class: MeshCollection

called by ParallelProcessor at completion

Overrides:

merge in class MeshCollection

Class LcaoCartoon

Field Summary

Fields inherited from class org.jmol.shapesurface.Isosurface

Fields inherited from class org.jmol.shape.MeshCollection

Fields inherited from class org.jmol.shape.Shape

Constructor Summary

Method Summary

Methods inherited from class org.jmol.shapesurface.Isosurface

Methods inherited from class org.jmol.shape.MeshCollection

Methods inherited from class org.jmol.shape.Shape

Methods inherited from class java.lang.Object

Field Detail

thisType

myColorPt

lcaoID

thisSet

isMolecular

rotationAxis

lcaoScale

lcaoTranslucent

lcaoTranslucentLevel

lcaoColorPos

lcaoColorNeg

isLonePair

isRadical

cappingObject

slabbingObject

fullCommand

Constructor Detail

LcaoCartoon

Method Detail

initShape

setProperty

setLcaoOn

setLcaoOn

deleteLcaoCartoon

deleteLcaoCartoon

createLcaoCartoon

createLcaoCartoon

getID

getShapeState

merge