Field Detail

• apiPlatform

  public javajs.api.GenericPlatform apiPlatform

• translucentCoverOnly

  public boolean translucentCoverOnly

• currentlyRendering

  public boolean currentlyRendering

• antialiasEnabled

  public boolean antialiasEnabled

• windowWidth

  protected int windowWidth

• windowHeight

  protected int windowHeight

• displayMinX

  protected int displayMinX

• displayMaxX

  protected int displayMaxX

• displayMinY

  protected int displayMinY

• displayMaxY

  protected int displayMaxY

• displayMinX2

  protected int displayMinX2

• displayMaxX2

  protected int displayMaxX2

• displayMinY2

  protected int displayMinY2

• displayMaxY2

  protected int displayMaxY2

• antialiasThisFrame

  protected boolean antialiasThisFrame

• inGreyscaleMode

  protected boolean inGreyscaleMode

• changeableColixMap

  protected short[] changeableColixMap

• backgroundImage

  protected java.lang.Object backgroundImage

• newWindowWidth

  protected int newWindowWidth

• newWindowHeight

  protected int newWindowHeight

• newAntialiasing

  protected boolean newAntialiasing

• bgcolor

  public int bgcolor

• xLast

  public int xLast

• yLast

  public int yLast

• slab

  public int slab

• depth

  public int depth

• width

  public int width

• height

  public int height

• ambientOcclusion

  public int ambientOcclusion

• colixCurrent

  protected short colixCurrent

• argbCurrent

  public int argbCurrent

• ht3

  protected int ht3

• isPass2

  public boolean isPass2

• textY

  protected int textY

• bufferSize

  public int bufferSize

• shader

  public Shader shader

• vwr

  protected Viewer vwr

• ENDCAPS_NONE

  public static final byte ENDCAPS_NONE

  See Also:

  Constant Field Values

• ENDCAPS_HIDDEN

  public static final byte ENDCAPS_HIDDEN

  See Also:

  Constant Field Values

• ENDCAPS_FLAT

  public static final byte ENDCAPS_FLAT

  See Also:

  Constant Field Values

• ENDCAPS_SPHERICAL

  public static final byte ENDCAPS_SPHERICAL

  See Also:

  Constant Field Values

• ENDCAPS_OPEN_TO_SPHERICAL

  public static final byte ENDCAPS_OPEN_TO_SPHERICAL

  See Also:

  Constant Field Values

• ENDCAPS_FLAT_TO_SPHERICAL

  public static final byte ENDCAPS_FLAT_TO_SPHERICAL

  See Also:

  Constant Field Values

• graphicsForMetrics

  protected java.lang.Object graphicsForMetrics

• EXPORT_RAYTRACER

  public static final int EXPORT_RAYTRACER

  See Also:

  Constant Field Values

• EXPORT_CARTESIAN

  public static final int EXPORT_CARTESIAN

  See Also:

  Constant Field Values

• EXPORT_NOT

  public static final int EXPORT_NOT

  See Also:

  Constant Field Values

• yGT

  public static final int yGT

  See Also:

  Constant Field Values

• yLT

  public static final int yLT

  See Also:

  Constant Field Values

• xGT

  public static final int xGT

  See Also:

  Constant Field Values

• xLT

  public static final int xLT

  See Also:

  Constant Field Values

• zGT

  public static final int zGT

  See Also:

  Constant Field Values

• zLT

  public static final int zLT

  See Also:

  Constant Field Values

• HUGE

  public static final int HUGE

  See Also:

  Constant Field Values

• argbNoisyUp

  public int argbNoisyUp

• argbNoisyDn

  public int argbNoisyDn

• transformedVectors

  protected javajs.util.V3[] transformedVectors

• normixCount

  protected static short normixCount

• currentFont

  protected javajs.awt.Font currentFont

Constructor Detail

• GData

  public GData()

  It is possible to instantiate this class with no Graphics3D. This will happen in the case of WebGL.

Method Detail

• initialize

  public void initialize​(Viewer vwr,
                         javajs.api.GenericPlatform apiPlatform)

• setDepth

  public void setDepth​(int depthValue)

  clipping from the front and the back

  the plane is defined as a percentage from the back of the image to the front

  for depth values:

  • 0 means 100% is shown
  • 25 means the back 25% is not shown
  • 50 means the back half is not shown
  • 100 means that nothing is shown

  Parameters:

  depthValue - rear clipping percentage [0,100]

• setSlab

  public void setSlab​(int slabValue)

  clipping from the front and the back

  the plane is defined as a percentage from the back of the image to the front

  For slab values:

  • 100 means 100% is shown
  • 75 means the back 75% is shown
  • 50 means the back half is shown
  • 0 means that nothing is shown

  Specified by:

  setSlab in interface JmolGraphicsInterface

  Parameters:

  slabValue - front clipping percentage [0,100]

• setSlabAndZShade

  public void setSlabAndZShade​(int slab,
                               int depth,
                               int zSlab,
                               int zDepth,
                               int zPower)

  Specified by:

  setSlabAndZShade in interface JmolGraphicsInterface

  Parameters:

  zSlab - for zShade

  zDepth - for zShade

  zPower -

• setAmbientOcclusion

  public void setAmbientOcclusion​(int value)

• isAntialiased

  public boolean isAntialiased()

  is full scene / oversampling antialiasing in effect

  Specified by:

  isAntialiased in interface JmolGraphicsInterface

  Returns:

  the answer

• getChangeableColix

  public short getChangeableColix​(int id,
                                  int argb)

• changeColixArgb

  public void changeColixArgb​(int id,
                              int argb)

• getColorArgbOrGray

  public int getColorArgbOrGray​(short colix)

• getShades

  public int[] getShades​(short colix)

• setGreyscaleMode

  public void setGreyscaleMode​(boolean greyscaleMode)

  controls greyscale rendering

  Parameters:

  greyscaleMode - Flag for greyscale rendering

• getSpecularPower

  public int getSpecularPower()

• setSpecularPower

  public void setSpecularPower​(int val)

  fractional distance to white for specular dot

  Parameters:

  val -

• getSpecularPercent

  public int getSpecularPercent()

• setSpecularPercent

  public void setSpecularPercent​(int val)

  sf in I = df * (N dot L) + sf * (R dot V)^p not a percent of anything, really

  Parameters:

  val -

• getSpecularExponent

  public int getSpecularExponent()

• setSpecularExponent

  public void setSpecularExponent​(int val)

  log_2(p) in I = df * (N dot L) + sf * (R dot V)^p for faster calculation of shades

  Parameters:

  val -

• getPhongExponent

  public int getPhongExponent()

• setPhongExponent

  public void setPhongExponent​(int val)

  p in I = df * (N dot L) + sf * (R dot V)^p

  Parameters:

  val -

• getDiffusePercent

  public int getDiffusePercent()

• setDiffusePercent

  public void setDiffusePercent​(int val)

  df in I = df * (N dot L) + sf * (R dot V)^p

  Parameters:

  val -

• getAmbientPercent

  public int getAmbientPercent()

• setAmbientPercent

  public void setAmbientPercent​(int val)

  fractional distance from black for ambient color

  Parameters:

  val -

• getSpecular

  public boolean getSpecular()

• setSpecular

  public void setSpecular​(boolean val)

• setCel

  public void setCel​(boolean val)

• getCel

  public boolean getCel()

• getCelPower

  public int getCelPower()

• setCelPower

  public void setCelPower​(int celPower)

• getLightSource

  public javajs.util.V3 getLightSource()

• isClipped3

  public boolean isClipped3​(int x,
                            int y,
                            int z)

• isClipped

  public boolean isClipped​(int x,
                           int y)

• isInDisplayRange

  public boolean isInDisplayRange​(int x,
                                  int y)

  Specified by:

  isInDisplayRange in interface JmolGraphicsInterface

• isClippedXY

  public boolean isClippedXY​(int diameter,
                             int x,
                             int y)

  Specified by:

  isClippedXY in interface JmolGraphicsInterface

• isClippedZ

  public boolean isClippedZ​(int z)

• clipCode3

  public int clipCode3​(int x,
                       int y,
                       int z)

• clipCode

  public int clipCode​(int z)

• getFont3D

  public javajs.awt.Font getFont3D​(float fontSize)

• getFont3DFS

  public javajs.awt.Font getFont3DFS​(java.lang.String fontFace,
                                     float fontSize)

• getFontFidFS

  public byte getFontFidFS​(java.lang.String fontFace,
                           float fontSize)

• getFont3DFSS

  public javajs.awt.Font getFont3DFSS​(java.lang.String fontFace,
                                      java.lang.String fontStyle,
                                      float fontSize)

• getFont3DScaled

  public javajs.awt.Font getFont3DScaled​(javajs.awt.Font font,
                                         float scale)

• getFontFid

  public byte getFontFid​(float fontSize)

• setBackgroundTransparent

  public void setBackgroundTransparent​(boolean TF)

  Parameters:

  TF -

• setBackgroundArgb

  public void setBackgroundArgb​(int argb)

  sets background color to the specified argb value

  Parameters:

  argb - an argb value with alpha channel

• setBackgroundImage

  public void setBackgroundImage​(java.lang.Object image)

• setWindowParameters

  public void setWindowParameters​(int width,
                                  int height,
                                  boolean antialias)

• setWinParams

  protected void setWinParams​(int width,
                              int height,
                              boolean antialias)

• setNewWindowParametersForExport

  public void setNewWindowParametersForExport()

• setWidthHeight

  protected void setWidthHeight​(boolean isAntialiased)

• beginRendering

  public void beginRendering​(javajs.util.M3 stereoRotationMatrix,
                             boolean translucentMode,
                             boolean isImageWrite,
                             boolean renderLow)

  Parameters:

  stereoRotationMatrix -

  translucentMode -

  isImageWrite -

  renderLow - TODO

• endRendering

  public void endRendering()

• snapshotAnaglyphChannelBytes

  public void snapshotAnaglyphChannelBytes()

• getScreenImage

  public java.lang.Object getScreenImage​(boolean isImageWrite)

  Parameters:

  isImageWrite -

  Returns:

  image object

• releaseScreenImage

  public void releaseScreenImage()

• applyAnaglygh

  public void applyAnaglygh​(STER stereoMode,
                            int[] stereoColors)

  Parameters:

  stereoMode -

  stereoColors -

• setPass2

  public boolean setPass2​(boolean antialias)

  Parameters:

  antialias -

  Returns:

  true if need a second (translucent) pass

• destroy

  public void destroy()

• clearFontCache

  public void clearFontCache()

• drawQuadrilateralBits

  public void drawQuadrilateralBits​(JmolRendererInterface jmolRenderer,
                                    short colix,
                                    javajs.util.P3 screenA,
                                    javajs.util.P3 screenB,
                                    javajs.util.P3 screenC,
                                    javajs.util.P3 screenD)

• drawTriangleBits

  public void drawTriangleBits​(JmolRendererInterface renderer,
                               javajs.util.P3 screenA,
                               short colixA,
                               javajs.util.P3 screenB,
                               short colixB,
                               javajs.util.P3 screenC,
                               short colixC,
                               int check)

• plotImage

  public void plotImage​(int x,
                        int y,
                        int z,
                        java.lang.Object image,
                        JmolRendererInterface jmolRenderer,
                        short bgcolix,
                        int width,
                        int height)

  Parameters:

  x -

  y -

  z -

  image -

  jmolRenderer -

  bgcolix -

  width -

  height -

• plotText

  public void plotText​(int x,
                       int y,
                       int z,
                       int colorArgbOrGray,
                       int bgColor,
                       java.lang.String text,
                       javajs.awt.Font font3d,
                       JmolRendererInterface jmolRenderer)

  Parameters:

  x -

  y -

  z -

  colorArgbOrGray -

  bgColor - TODO

  text -

  font3d -

  jmolRenderer -

• renderBackground

  public void renderBackground​(JmolRendererInterface jmolRenderer)

  Parameters:

  jmolRenderer -

• setFont

  public void setFont​(javajs.awt.Font font3d)

  Parameters:

  font3d -

• setFontFid

  public void setFontFid​(byte fid)

  Parameters:

  fid -

• setColor

  public void setColor​(int argb)

• setC

  public boolean setC​(short colix)

  Parameters:

  colix -

  Returns:

  TRUE if correct pass (translucent or opaque)

• isDirectedTowardsCamera

  public boolean isDirectedTowardsCamera​(short normix)

  Parameters:

  normix -

  Returns:

  true if front

• roundInt

  public static int roundInt​(int a)

  JavaScript won't really have an integer here after integer division. So we need to round it to the integer between it and zero.

  Parameters:

  a -

  Returns:

  number closest to zero

• clear

  public void clear()

• renderAllStrings

  public void renderAllStrings​(java.lang.Object jmolRenderer)

  Specified by:

  renderAllStrings in interface JmolGraphicsInterface

• addRenderer

  public void addRenderer​(int tok)

  Parameters:

  tok -

• getHermiteList

  public static void getHermiteList​(int tension,
                                    javajs.util.T3 p0,
                                    javajs.util.T3 p1,
                                    javajs.util.T3 p2,
                                    javajs.util.T3 p3,
                                    javajs.util.T3 p4,
                                    javajs.util.T3[] list,
                                    int index0,
                                    int n,
                                    boolean isPt)

  Used by Navigator, BioShapeRenderer, and DrawRenderer

  Parameters:

  tension -

  p0 -

  p1 -

  p2 -

  p3 -

  p4 -

  list -

  index0 -

  n -

  isPt -

• setTextPosition

  public void setTextPosition​(int y)

• getTextPosition

  public int getTextPosition()

• getTransformedVertexVectors

  public javajs.util.V3[] getTransformedVertexVectors()

• getFont3DCurrent

  public javajs.awt.Font getFont3DCurrent()